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PubMedPubMed

Mapping of document types from PubMed

All publications from PubMed is imported as Contribution to Journal -> Article. Only exception to this rule is if publication type has the ID D016454 (<PublicationType UI="D016454">Review</PublicationType>)

Mapping of fields in PubMed

Field in PubMed

Field in Pure

Base UK

Field in Pure

Base DK

Field in Pure

Base FI

Fields in Pure

Base BE

Note
MedlineCitation Status X X X X  
Owner X X X X  
PMID Version X X X X  
DateCreated X X X X  
Article PubModel X X X X  
JournalIssue CitedMedium X X X X  
ISSN ISSN or ISSN (Electronic) on the related journal ISSN på tilknyttet tidsskrift ISSN on the related journal ISSN on the related journal  
Volume Volume Vol/bind Volume Volume  
Issue Issue number Nummer

Journal number

Journal number  
PubDate Journal publication date Tidsskriftets publikationsdato

Publication date

Publication date

If this date is not available, we use the first provided date from this list

  • pubmed publication date
  • medline publication date
  • journal publication period from tha MedlineDate tag
Title Title of the related journal Titel på relateret tidsskrift Title of the related journal Title of the related journal Matched to an existing journal or a new is created
ISOAbbreviation X X X X  
CopyrightInformation X X Publisher's Copyright Statement X  
ArticleTitle Bidragets titel på originalsprog Title of the contribution in original language Title of the contribution in original language Article title and subtitle is divided by the first :
MedlinePgn Pages (from-to) Sider (fra-til) Pages (from-to) Pages (from-to) total pages is calculated
AbstractText Abstract Abstract (engelsk) X Abstract  
Author - LastName Related author Last name Relateret forfatters efternavn Related author Last name Related author Last name Matched to an existing or a new external person is created
Author - ForeName Related author First name Relateret forfatters fornavn Related author First name Related author First name Matched to an existing or a new external person is created
Author - Initials X X X X  
Author - Suffix X X X X  
CollectiveName
Group author Forfattergruppering Group author Group author When group author is added, author will as default be set to "hidden"
Language Originalsprog Original language Original language  
PublicationType X X X X  
ArticleDate DateType X X X X  
MedlineTA X X X X  
NlmUniqueID X X X X  
ISSNLinking X X X X  
MeshHeading - DescriptorName X X Keywords X  

PubMedPubDate

PubStatus="received"

X X X X  

PubMedPubDate

PubStatus="accepted"

X X X X  

PubMedPubDate

PubStatus="aheadofprint"

X X X X  

PubMedPubDate

PubStatus="entrez"

X X X X  

PubMedPubDate

PubStatus="pubmed"

X X X X  

PubMedPubDate

PubStatus="medline"

X X X X  
ArticleId IdType="pii" X X X X  
ArticleId IdType="doi" DOIs DOI DOIs DOIs  
ArticleId IdType="pubmed" Source-ID Kilde ID Source-ID Source-ID  

Published at November 09, 2023

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Table of Contents
  1. Mapping of document types from PubMed
  2. Mapping of fields in PubMed
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  • Setting up online sources overview
  • Mapping of data from import sources
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